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Series GSE51936 Query DataSets for GSE51936
Status Public on Dec 02, 2013
Title Genome-wide analyses of GATA6 occupancy and functions provide insights into its oncogenic mechanisms in human gastric cancer [ChIP-Seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To identifiy core GATA6 functions and transcriptional targets in human gastric cancer, including additional subservient transcriptional regulators via integrative analysis of GATA6 transcription factor occupancy, gene dependency, and tumor synexpression.
Overall design Transcription factor binding site identification ChIP-Seq performed on 4 samples.
Contributor(s) Sulahian R, Shivdasani RA
Citation(s) 24317510
Submission date Oct 31, 2013
Last update date May 15, 2019
Contact name Ramesh Shivdasani
Phone +1 617 632 5746
Organization name Dana-Farber Cancer Institute
Department Department of Medical Oncology
Lab Ramesh Shivdasani
Street address Dana Bldg, Room 720, 450 Brookline Ave
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (4)
GSM1255511 AGS GATA6
GSM1255512 AGS IgG Control
GSM1255513 HUG1N GATA6
BioProject PRJNA225860
SRA SRP032446

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Supplementary file Size Download File type/resource
GSE51936_AGS.peaks.bed.gz 201.7 Kb (ftp)(http) BED
GSE51936_HUG1N.peaks.bed.gz 132.7 Kb (ftp)(http) BED
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Raw data are available in SRA
Processed data are available on Series record

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