NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE50499 Query DataSets for GSE50499
Status Public on Nov 20, 2014
Title FMRP-associated MOV10 facilitates and antagonizes miRNA-mediated regulation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The fragile X mental retardation protein FMRP is an RNA binding protein that regulates translation of its bound mRNAs through incompletely defined mechanisms. FMRP has been linked to the microRNA pathway and we show here that it is associated with MOV10, a putative helicase that is also associated with the microRNA pathway. We show that FMRP associates with MOV10 in an RNA-dependent manner and facilitates MOV10-association with RNAs in brain. We identified the RNA sequences recognized by MOV10 using iCLIP and found an increased number of G-quadruplexes in the CLIP sites. We provide evidence that MOV10 facilitates microRNA-mediated translation regulation and also has the novel role of increasing the expression of a subset of RNAs by sterically hindering Argonaute2 association. In summary, we have identified a new mechanism for FMRP-mediated translational regulation through its association with MOV10.
 
Overall design Comparison of MOV10 siRNA knockdown, irrelevant siRNA control and MOV10 overexpression on total RNA levels
 
Contributor(s) Kim M, Kenny P, Khetani R, Arcila M, Kosik KS, Ceman S
Citation(s) 25464849
Submission date Aug 30, 2013
Last update date May 15, 2019
Contact name Stephanie Ceman
E-mail(s) sceman@illinois.edu
Phone 217-244-6793
Organization name University of Illinois-Urbana Champaign
Department Cell and Developmental Biology
Lab Ceman
Street address 601 S. Goodwin Ave
City Urbana
State/province IL
ZIP/Postal code 61821
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (8)
GSM1220262 MOV10 knockdown 2
GSM1220263 MOV10 knockdown 3
GSM1220264 MOV10 overexpression 1
Relations
BioProject PRJNA217781
SRA SRP029367

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE50499_GEO_Ceman_counts.txt.gz 320.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap