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Series GSE48914 Query DataSets for GSE48914
Status Public on Aug 01, 2013
Title Gene expression arrays of cardiomyocyte ribosome-associated RNAs during zebrafish heart regeneration
Organism Danio rerio
Experiment type Expression profiling by array
Summary A transgenic line cmlc2:TRAP was made to express EGFP-fused ribosomal protein L10a (EGFP-L10a) in zebrafish cardiomyocytes. Then ribosome-associated RNAs were immuoprecipitated from uninjured and injured adult cmlc2:TRAP fish to determine the differential expression changes during zebrafish heart regeneration.
Overall design A nine chip study with cardiomyocyte ribosome associated RNAs purified from three separate isolation of uninjured adult cmlc2:TRAP fish hearts, three separate isolation of 1 day post amupation (dpa) adult cmlc2:TRAP fish hearts, and three separate isolation of 7 dpa adult cmlc2:TRAP fish hearts.
Contributor(s) Poss KD
Citation(s) 23901114
Submission date Jul 16, 2013
Last update date Nov 18, 2013
Contact name Kenneth Daniel Poss
Phone 919-681-8457
Organization name Duke University, HHMI
Department Cell Biology
Street address 349 Nanaline Duke Building, Box 3709, Duke University Medical Center
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
Platforms (1)
GPL17210 NimbleGen Zebrafish 12x135K Array [090818_Zv7_EXPR]
Samples (9)
GSM1186737 CM_TRAP_uninjured1
GSM1186738 CM_TRAP_uninjured2
GSM1186739 CM_TRAP_uninjured3
BioProject PRJNA212301

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48914_RAW.tar 30.8 Mb (http)(custom) TAR (of PAIR)
Raw data provided as supplementary file
Processed data included within Sample table

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