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Series GSE48809 Query DataSets for GSE48809
Status Public on Jul 12, 2013
Title The metabolic niche of a prominent sulfate-reducing human gut bacterium
Organisms [Clostridium] symbiosum; Mus musculus; Bacteroides thetaiotaomicron VPI-5482; Bacteroides ovatus ATCC 8483; Bacteroides caccae ATCC 43185; Collinsella aerofaciens ATCC 25986; Marvinbryantia formatexigens DSM 14469; Escherichia coli str. K-12 substr. MG1655; [Eubacterium] rectale ATCC 33656; Desulfovibrio piger GOR1
Experiment type Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 23898195
Submission date Jul 11, 2013
Last update date May 15, 2019
Contact name Federico E Rey
E-mail(s) reyf@wustl.edu
Phone 314-963-0284
Organization name Washington University
Department Pathology
Lab Gordon
Street address 4444 Forest Park Blvd
City St Louis
State/province MO
ZIP/Postal code 63108
Country USA
 
Platforms (7)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL17383 Illumina Genome Analyzer IIx (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Desulfovibrio piger GOR1; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469)
GPL17431 Illumina HiSeq 2000 (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469)
Samples (135)
GSM1177457 EXP_6_Pool_RNA_K4_10.14.09
GSM1177458 EXP_12_NoDp4
GSM1177459 EXP_12_Dp6
This SuperSeries is composed of the following SubSeries:
GSE48409 The metabolic niche of a prominent sulfate-reducing human gut bacterium [1]
GSE48807 The metabolic niche of a prominent sulfate-reducing human gut bacterium [2]
GSE48808 The metabolic niche of a prominent sulfate-reducing human gut bacterium [3]
Relations
BioProject PRJNA211821

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48809_RAW.tar 4.6 Mb (http)(custom) TAR (of TXT)

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