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Series GSE48213 Query DataSets for GSE48213
Status Public on Aug 20, 2013
Title Transcriptional profiling of a breast cancer cell line panel using RNAseq technology
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary 56 breast cancer cell lines were profiled to identify patterns of gene expression associated with subtype and response to therapeutic compounds.
 
Overall design Cell lines were profiled in their baseline, unperturbed state.
 
Contributor(s) Gray JW, Heiser LM
Citation(s) 24176112
Submission date Jun 21, 2013
Last update date Feb 21, 2019
Contact name Laura M. Heiser
E-mail heiserl@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Park Rd.
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (56)
GSM1172844 184A1, RNA-Seq
GSM1172845 184B5, RNA-Seq
GSM1172846 21MT1, RNA-Seq
This SubSeries is part of SuperSeries:
GSE48216 Modeling precision treatment of breast cancer
Relations
BioProject PRJNA210428
SRA SRP026537

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48213_RAW.tar 13.4 Mb (http)(custom) TAR (of TXT)
Raw data are available in SRA
Processed data provided as supplementary file

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