|
| Status |
Public on May 27, 2014 |
| Title |
Discovery of the p53 targetome in MCF7 cells from ChIP-Seq data |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
RNA-seq and ChIP-seq on MCF-7 breast cancer cell line upon activation of p53 by the non-genotoxic small molecule Nutlin-3a
|
| |
|
| Overall design |
ChIP-seq on p53 in MCF7 with Nutlin-3a stimulation (S) in triplicate, and the control (input), in stimulated and non stimulated, using illumina HiSeq 2000
|
| |
|
| Contributor(s) |
Janky R, Verfaillie A, Aerts S |
| Citation(s) |
25058159 |
| |
| Submission date |
May 17, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Rekin's Janky |
| E-mail(s) |
rekins.janky@med.kuleuven.be
|
| Organization name |
KU Leuven
|
| Department |
Department of Human Genetics
|
| Lab |
Laboratory of Computational Biology
|
| Street address |
Herestraat 49 box 602
|
| City |
Leuven |
| ZIP/Postal code |
3000 |
| Country |
Belgium |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (3) |
|
| This SubSeries is part of SuperSeries: |
| GSE47043 |
Discovery of the p53 targetome in MCF7 cells from RNA-seq and ChIP-seq data |
|
| Relations |
| BioProject |
PRJNA203360 |
| SRA |
SRP022870 |
