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Status |
Public on Jul 01, 2013 |
Title |
Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUS (ChIP) |
Organism |
Arabidopsis thaliana |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
Characterization of the activities of the transcription factor that AG encodes throughout flower development using perturbation assays and ChIP-Seq in combination with a floral induction system (FIS) that allows a stage-specific analysis of flower development.
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Overall design |
Examination of genomic regions bound by fully functional AG-GFP protein at approx floral stage 4-5 as compared to a negative control sample.
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Contributor(s) |
Ó’Maoiléidigh D, Wuest S, Ryan P, Raganelli A, Wellmer F |
Citation(s) |
23821642 |
|
Submission date |
Apr 10, 2013 |
Last update date |
May 15, 2019 |
Contact name |
Pat Ryan |
E-mail(s) |
pat.ryan12@gmail.com
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Organization name |
TCD
|
Street address |
College Green
|
City |
Dublin |
ZIP/Postal code |
na |
Country |
Ireland |
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Platforms (1) |
GPL11221 |
Illumina Genome Analyzer IIx (Arabidopsis thaliana) |
|
Samples (4)
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GSM1120014 |
AG-GFP (AP1-GR ap1 cal) ChIPseq replicate 1 |
GSM1120015 |
AG-GFP (AP1-GR ap1 cal) ChIPseq replicate 2 |
GSM1120016 |
negative control (AP1-GR ap1 cal) replicate 1 |
GSM1120017 |
negative control (AP1-GR ap1 cal) replicate 2 |
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This SubSeries is part of SuperSeries: |
GSE45939 |
Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUS |
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Relations |
BioProject |
PRJNA196761 |
SRA |
SRP020911 |