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| Status |
Public on Dec 01, 2013 |
| Title |
In Vitro Global Gene Expression Analyses Support the Ethnopharmacological Use of Achyranthes aspera |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Examining of the global gene expression changes in cultured human pancreatic cancer cells effected by the extract of A. aspera leaves. Comparison of cells treated for 24, 48 and 72 hours with the respective controls (untreated) allowed to select key genes that may be of interest as a response markers.
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| |
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| Overall design |
Two-condition experiment, treated vs. untreated cells at 3 time points. Biological replicates: 6 control and 6 treated replicates for 24 hours time point; 4 control and 4 treated replicated for 48 hours time point; 2 control and 2 treated replicates for 72 hours time point.
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| |
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| Contributor(s) |
Subbarayan PR, Sarkar M, Nathanson L, Doshi N, Lokeshwar BL, Ardalan B |
| Citation(s) |
24454496 |
| Submission date |
Feb 13, 2013 |
| Last update date |
Feb 22, 2018 |
| Contact name |
Subbarayan R. Pochi |
| E-mail(s) |
spochi@med.miami.edu
|
| Organization name |
University of Miami
|
| Department |
Medicine
|
| Lab |
Fox 431A
|
| Street address |
1550 NW 10 Ave
|
| City |
Miami |
| State/province |
FL |
| ZIP/Postal code |
33136 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL4133 |
Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) |
|
| Samples (12)
|
| GSM1082444 |
Treated vs untreated at 24 h Replicate1 |
| GSM1082445 |
Treated vs untreated at 24 h Replicate2 |
| GSM1082446 |
Treated vs untreated at 24 h Replicate3 |
| GSM1082447 |
Treated vs untreated at 24 h Replicate4 |
| GSM1082448 |
Treated vs untreated at 24 h Replicate5 |
| GSM1082449 |
Treated vs untreated at 24 h Replicate6 |
| GSM1082450 |
Treated vs untreated at 48 h Replicate1 |
| GSM1082451 |
Treated vs untreated at 48 h Replicate2 |
| GSM1082452 |
Treated vs untreated at 48 h Replicate3 |
| GSM1082453 |
Treated vs untreated at 48 h Replicate4 |
| GSM1082454 |
Treated vs untreated at 72 h Replicate1 |
| GSM1082455 |
Treated vs untreated at 72 h Replicate2 |
|
| Relations |
| BioProject |
PRJNA189326 |
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