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Series GSE43894 Query DataSets for GSE43894
Status Public on Jun 30, 2013
Title Expression analysis of 3T3 cells that express Arabidopsis-derived Diaminopimelate Decarboxylase (DDC) in response to growth on meso-2,6-diaminopimelic acid (DAP) versus L-Lysine
Organism Mus musculus
Experiment type Expression profiling by array
Summary This experiment aimed to investigate whether cells that express the L-Lysine-producing enzyme DDC exhibit any mRNA changes when grown on precursor DAP relative to L-Lysine.
 
Overall design Total RNA obtained from DDC-expressing 3T3 cells after 3 days in culture with amino acid precursor DAP, L-Lysine, or starved of both.
 
Contributor(s) Gauthier NP, Soufi B, Walkowicz WE, Pedicord VA, Mavrakis KJ, Macek B, Gin DY, Sander C, Miller ML
Citation(s) 23817070
Submission date Jan 30, 2013
Last update date Jun 14, 2018
Contact name Nicholas Gauthier
Organization name MSKCC
Street address 1275 York Avenue, Box #460
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (9)
GSM1074101 DDC-expressing 3T3 cells in L-Lysine Rep1
GSM1074102 DDC-expressing 3T3 cells in L-Lysine Rep2
GSM1074103 DDC-expressing 3T3 cells in L-Lysine Rep3
Relations
BioProject PRJNA188076

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43894_RAW.tar 3.1 Mb (http)(custom) TAR
GSE43894_non-normalized_data.txt.gz 1.5 Mb (ftp)(http) TXT
Raw data is available on Series record
Processed data included within Sample table

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