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Series GSE43793 Query DataSets for GSE43793
Status Public on Nov 20, 2013
Title Identification of differentially expressed small RNAs of colon cancer stem cells.
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Colorectal carcinoma (CRC) is one of the most common cancers worldwide. Re-evaluating our current knowledge on CRC and developing novel therapeutic strategies is still crucial. Accumulating evidence suggests that cancer cells possess characters reminiscent of those of normal stem cells. Unveiling small RNAs responsible for cell stemness and chemoradioresistance should eventually lead to the development of novel therapeutic approaches.
Overall design Expression profiles of parental CRC cells and cancer spheres expanded under stem cell medium cultivation were generated for identifying key regulators.
Contributor(s) Hwang W, Wang H
Citation(s) 24561623
Submission date Jan 28, 2013
Last update date May 15, 2019
Contact name Wei-Lun Hwang
Organization name National Yang Ming Chiao Tung University
Department Department of Biotechnology and Laboratory Science in Medicine
Street address No.155, Sec.2, Linong Street
City Taipei
ZIP/Postal code 11221
Country Taiwan
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (4)
GSM1071335 HT29 parental cells
GSM1071336 HT29 spheres cells
GSM1267825 HCT15 parental cells
This SubSeries is part of SuperSeries:
GSE43802 Characterization of Snail-associated small RNAs in colon cancer cells
BioProject PRJNA188068
SRA SRP018284

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43793_RAW.tar 40.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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