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Series GSE42262 Query DataSets for GSE42262
Status Public on Nov 14, 2012
Title Chromatin occupancy of key transcriptional regulators in P493-6 cells with various levels of c-Myc expression
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary P493-6 cells are immortalized human peripheral B cells that carry a conditional, tetracycline-regulated myc gene. We present ChIP-seq analysis of key transcritional regulators in P493-6 cells expressing various levels of c-Myc: 0hr (low c-Myc levels), 1hr (intermediate c-Myc levels), 24hr (very high c-Myc levels) and No Tet (steady-state c-Myc levels).
Overall design Brd4, c-Myc, Max, Med1, RNAPII, and the chromatin modification H3K27Ac were profiled in P493-6 cells
Contributor(s) Peter R, Loven J, Young RA
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Submission date Nov 13, 2012
Last update date May 15, 2019
Contact name Richard A Young
Phone 617-258-5219
Organization name Whitehead Institute for Biomedical Research
Lab Young Lab
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (12)
GSM1036401 Brd4 P493-6 T=0_ChipSeq
GSM1036402 Brd4 P493-6 T=1 hour_ChipSeq
GSM1036403 Brd4 P493-6 T=24 hour_ChipSeq
BioProject PRJNA179481
SRA SRP017169

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Supplementary file Size Download File type/resource
GSE42262_RAW.tar 7.9 Mb (http)(custom) TAR (of WIG)
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Raw data are available in SRA
Processed data provided as supplementary file

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