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Series GSE40354 Query DataSets for GSE40354
Status Public on Mar 05, 2013
Title Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Recognition of microbial patterns and host derived damage signals by host pattern recognition receptors is a key step in immune activation in multicellular eukaryotes. Here we show how mutations in ethylene signaling and the coreceptor bak1 affect host immune responses triggered by elicitors.
 
Overall design A 51 DNA microarray study using total RNA from Arabidopsis mutants (ein2-1, bak1-3, efr-1 and pepr1-1 pepr2-3) as well as wild type treated with elf18 or Pep2 with three biological replicates.
 
Contributor(s) Tsuda K, Tintor N, Saijo Y
Citation(s) 23431187, 26574534
Submission date Aug 24, 2012
Last update date Jun 12, 2017
Contact name Kenichi Tsuda
E-mail(s) tsuda@mpipz.mpg.de
Phone +49-(0)221-5062-302
Organization name Max Planck Institute for Plant Breeding Research
Department Plant Microbe Interactions
Lab Kenichi Tsuda
Street address Carl-von-Linne Weg 10
City Cologne
ZIP/Postal code 50829
Country Germany
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (51)
GSM991872 01_WT_0h_rep1
GSM991873 02_WT_0h_rep2
GSM991874 03_WT_0h_rep3
Relations
BioProject PRJNA173680

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40354_RAW.tar 100.9 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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