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Series GSE40279 Query DataSets for GSE40279
Status Public on Nov 21, 2012
Title Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of individuals across a large age range. The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 450k CpGs from human whole blood.
 
Overall design Bisulphite converted DNA from the 656 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip
 
Contributor(s) Zhang K, Ideker T
Citation(s) 23177740
Submission date Aug 21, 2012
Last update date Jul 06, 2022
Contact name Justin Guinney
E-mail(s) justin.guinney@sagebase.org
Organization name Sage Bionetworks
Street address 2606 E Roy St
City Seattle
State/province WA
ZIP/Postal code 98110
Country USA
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (656)
GSM989827 age 67y 1001
GSM989828 age 89y 1002
GSM989829 age 66y 1003
Relations
Reanalyzed by GSE207605
BioProject PRJNA173415

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40279_RAW.tar 183.1 Mb (http)(custom) TAR
GSE40279_average_beta.txt.gz 1.1 Gb (ftp)(http) TXT
GSE40279_average_beta_GSM989827-GSM989990.txt.gz 301.4 Mb (ftp)(http) TXT
GSE40279_average_beta_GSM989991-GSM990299.txt.gz 301.1 Mb (ftp)(http) TXT
GSE40279_average_beta_GSM990300-GSM990463.txt.gz 299.5 Mb (ftp)(http) TXT
GSE40279_average_beta_GSM990464-GSM990627.txt.gz 300.2 Mb (ftp)(http) TXT
GSE40279_sample_key.txt.gz 4.5 Kb (ftp)(http) TXT
GSE40279_signal_intensities.txt.gz 5.0 Gb (ftp)(http) TXT
Raw data are available on Series record
Processed data included within Sample table
Processed data are available on Series record
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