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Series GSE40142 Query DataSets for GSE40142
Status Public on Sep 21, 2012
Title A framework for identification of actionable cancer genome dependencies in small cell lung cancer
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary We analyzed copy numbers of 60 SCLC cell lines using 6.0 SNP-arrays. For a subgroup of 36 cell lines, previously published copy number data was utilized.
CEL and SEG files are included for all cell lines, for which copy number data were not publicly available.
 
Overall design DNA was extracted from SCLC cell lines and copy number data was generated for all samples
 
Contributor(s) Sos ML, Dietlein F, Thomas RK
Citation(s) 23035247
Submission date Aug 15, 2012
Last update date Nov 27, 2018
Contact name Felix Dietlein
Organization name University of Cologne
Department Department of Translational Genomics
Street address Weyertal 115b
City Cologne
State/province NRW
ZIP/Postal code 50931
Country Germany
 
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (24)
GSM986170 Cell Line H196
GSM986171 Cell Line H211
GSM986172 Cell Line H146
Relations
BioProject PRJNA172918

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40142_CN_SCLC.seg.txt.gz 114.8 Kb (ftp)(http) TXT
GSE40142_RAW.tar 788.7 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data are available on Series record

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