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Series GSE39233 Query DataSets for GSE39233
Status Public on Jul 10, 2012
Title Placental PPARg-Regulated Genes
Organism Mus musculus
Experiment type Expression profiling by array
Summary Robust identification of placental PPARg target genes via mutliple PPARg-dependence criteria.
Integration of differential expression data from Pparg-null, Rxra-null, Med1-nul and Ncoa6-null placentas and from WT and Pparg-null Trophoblast stem cells (TSC) differentiated for 2 or 4 days in the presence or absence of the PPARg agonist Rosiglitazone (Rosi).
 
Overall design [Placentas]
Three pools of three WT placentas, each vs a litter-matched pool of three Pparg-null placentas
Three pools of three WT placentas, each vs a litter-matched pool of three Rxra-null placentas
Three pools of three WT placentas, each vs a litter-matched pool of three Med1-null placentas
Three pools of three WT placentas, each vs a litter-matched pool of three Ncoa6-null placentas

[Trophoblast stem cells (TSC)]
Three independent WT TSC lines differentiated for two and four days in the presence or absence of Rosi vs two independent Pparg-null TSC lines differntiated for the same durations in the presence of Rosi
 
Contributor(s) Barak Y
Citation(s) 22967998
Submission date Jul 10, 2012
Last update date Feb 11, 2019
Contact name Yaacov Barak
E-mail baraky@mwri.magee.edu
Phone 4126418557
Organization name Magee-Womens Research Institute/University of Pittsburgh
Department OBGYN and Reproductive Sciences
Street address 204 Craft Ave
City Pittsburgh
State/province PA
ZIP/Postal code 15217
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (40)
GSM958426 Pparg+/+ placenta, bio rep 1
GSM958427 Pparg+/+ placenta, bio rep 3
GSM958428 Pparg+/+ placenta, bio rep 4
Relations
BioProject PRJNA170319

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39233_RAW.tar 145.5 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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