NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE38358 Query DataSets for GSE38358
Status Public on Jun 01, 2012
Title Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA (ChIP-Seq)
Organism Arabidopsis thaliana
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Characterization of the activities of the transcription factors that AP3 and PI encode throughout flower development using perturbation and ChIPSeq assays in combination with a floral induction system (FIS) that allows a stage-specific analysis of flower development.
 
Overall design Examination of genomic regions bound by fully functional AP3-GFP and PI-GFP proteins at approx floral stage 4-5 as compared to a negative control sample
 
Contributor(s) Wuest S, O'Maoileidigh D, Wellmer F
Citation(s) 22847437
Submission date May 31, 2012
Last update date Sep 04, 2019
Contact name Samuel Elias Wuest
E-mail(s) samuel.wuest@ieu.uzh.ch
Phone +41 44 635 44 99
Organization name University of Zurich
Department Institute of Evolutionary Biology and Environmental Studies
Street address Winterthurerstrasse 190
City Zurich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL11221 Illumina Genome Analyzer IIx (Arabidopsis thaliana)
Samples (3)
GSM940585 PI-GFP (AP1-GR ap1 cal) ChIPseq
GSM940586 AP3-GFP (AP1-GR ap1 cal) ChIPseq
GSM940587 negative control (AP1-GR ap1 cal)
This SubSeries is part of SuperSeries:
GSE38363 Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA
Relations
SRA SRP013458
BioProject PRJNA167820

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38358_RAW.tar 450.0 Kb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap