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Series GSE37027 Query DataSets for GSE37027
Status Public on Aug 02, 2012
Title Cell type-specific gene expression profiling of Drosophila neurons [RNA-Seq]
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression profiling of nuclei isolated from genetically defined neuronal subpopulations of the adult Drosophila brain.
 
Overall design Gene expression profiles were generated from nuclei isolated from all neurons (R57C10-GAL4), Kenyon cells (OK107-GAL4), and octopaminergic (Tdc2-GAL4) neurons in the adult Drosophila head using a method similar to INTACT (Deal and Henikoff, 2010; Steinner et al., 2012). Sequencing was performed with an Illumina HiSeq 2000.
 
Contributor(s) Henry GL, Davis FP, Picard S, Eddy SR
Citation(s) 22855560
Submission date Apr 04, 2012
Last update date Jan 23, 2019
Contact name Fred P Davis
E-mail davisf@janelia.hhmi.org
Phone 571-209-4000-3437
Organization name HHMI Janelia Farm Research Campus
Street address 19700 Helix Dr
City Ashburn
State/province VA
ZIP/Postal code 20147
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (7)
GSM909103 Whole brain
GSM909104 R57C10 rep1
GSM909105 R57C10 rep2
This SubSeries is part of SuperSeries:
GSE37033 Cell type-specific gene expression and chromatin profiling of Drosophila neurons
Relations
BioProject PRJNA157879
SRA SRP012051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE37027_RAW.tar 1.0 Gb (http)(custom) TAR (of BW)
GSE37027_rnaseq_pergene_summary.txt.gz 776.6 Kb (ftp)(http) TXT
GSE37027_rnaseq_perisoform_summary.txt.gz 1.3 Mb (ftp)(http) TXT
Processed data provided as supplementary file
Processed data is available on Series record
Raw data are available in SRA

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