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Series GSE36428 Query DataSets for GSE36428
Status Public on Oct 01, 2012
Title Modulation of activation-associated host cell gene expression by the apicomplexan parasite Theileria annulata
Organisms Theileria annulata; Bos taurus
Experiment type Expression profiling by array
Summary The experiment investigates bovine gene expression in response to LPS in uninfected and Theileria annulata-infected cell cultures
A subset of genes are identified which are activated in response to LPS stimulation with further modulation due to parasite infection.
Overall design Six experimental conditions with three replicates per condition. Total RNA prepared from cell cultures. BL20 (uninfected bovine lymphosarcoma cell line), BL20 4 hours post-LPS stimulation, BL20 18 hours post-LPS, TBL (T. annulata infected bovine cell line), TBL 4 hours post-LPS, TBL 18 hours post-LPS. Each hydridisation represents bovine and parasite gene expression on a single channel and 2 technical replicates of each probeset are represented on the chip.
Contributor(s) Durrani Z, Weir W, Pillai S, Kinnaird J, Shiels B
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Submission date Mar 12, 2012
Last update date Oct 02, 2012
Contact name William Weir
Organization name University of Glasgow
Department Institute of Infection, Immunity and Inflammation
Lab Theileria lab
Street address Room 220, Henry Wellcome Building, Garscube Campus, Bearsden Road
City Glasgow
ZIP/Postal code G61 1QH
Country United Kingdom
Platforms (1)
GPL15339 NimbleGen B. Taurus and T. annulata 385K 080829_B_taurus_JK_EXP
Samples (18)
GSM893182 Bos taurus BL20 control rep1
GSM893183 Bos taurus BL20 control rep2
GSM893184 Bos taurus BL20 control rep3
BioProject PRJNA153233

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36428_RAW.tar 112.1 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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