|
| Status |
Public on May 17, 2012 |
| Title |
Human lung adenocarcinoma DNA copy number profiling |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
|
| Summary |
Lung adenocarcinoma’s genomic alterations exhibit vast variation. Lung adenocarcinoma also has previously described intrinsic gene expression subtypes (Hayes et al. 2006, PMID: 17075127). This study’s aim was to detect and validate subtype-specific alterations. A portion of these specimens were also assayed for genomewide transcription in GSE26939.
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| |
|
| Overall design |
103 tumor samples and 30 normal samples were quantified for DNA copy number using Affymetrix SNP microarrays.
|
| |
|
| Contributor(s) |
Wilkerson MD, Hayes DN |
| Citation(s) |
22590557 |
| |
| Submission date |
Mar 08, 2012 |
| Last update date |
Nov 27, 2018 |
| Contact name |
Matthew D Wilkerson |
| E-mail(s) |
mwilkers@med.unc.edu
|
| Phone |
919-966-3864
|
| Fax |
919-966-8212
|
| URL |
http://cancer.unc.edu/nhayes
|
| Organization name |
University of North Carolina at Chapel Hill
|
| Department |
Lineberger Comprehensive Cancer Center
|
| Lab |
D. Neil Hayes
|
| Street address |
450 West Drive
|
| City |
Chapel Hill |
| State/province |
NC |
| ZIP/Postal code |
27599-7295 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL3720 |
[Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
|
| Samples (133)
|
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| This SubSeries is part of SuperSeries: |
|
| Relations |
| BioProject |
PRJNA155569 |
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