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Series GSE36326 Query DataSets for GSE36326
Status Public on Oct 22, 2012
Title Targeted inhibition of human breast cancer cell lines selected as model systems of ERBB2-positive/EGFR high breast cancer [RPPA-SKBR3]
Organism Homo sapiens
Experiment type Protein profiling by protein array
Summary EGFR-inhibition is required for targeted therapies of ERBB2-positive/EGFR high breast cancer.
Approximately 30% of human ERBB2-positive breast tumors also express EGFR.
 
Overall design Three targeted therapeutics (erlotinib, pertuzumab, trastuzumab) and two ligands (EGF, HRG) were analyzed in all possible combinations. Each experiment involving inhibition with targeted drugs was performed in three, and measurements without inhibitors were performed in five biological replicates. This resulted in 780 samples. HRG stimulated cells under the triple drug combination exceptionally have two biological replicates. Incubation with therapeutics only and dilution series of control lysated were included as controls.
 
Contributor(s) Henjes F, Bender C, von der Heyde S, Braun L, Mannsperger HA, Schmidt C, Wiemann S, Hasmann M, Aulmann S, Beissbarth T, Korf U
Citation(s) 23552733
Submission date Mar 07, 2012
Last update date Aug 15, 2014
Contact name Ulrike Korf
E-mail(s) u.korf@dkfz.de
Phone 0049 (0) 6221 424765
Fax 0049 (0) 6221 423454
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 580
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platforms (1)
GPL15319 Targeted array-based proteomics [RPPA-SKBR3]
Samples (2)
GSM888927 SKBR3_pERK1/2_T202Y204
GSM888928 SKBR3_pAKT_S473
This SubSeries is part of SuperSeries:
GSE36327 Targeted inhibition of human breast cancer cell lines selected as model systems of ERBB2-positive/EGFR high breast cancer
Relations
BioProject PRJNA155575

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36326_RAW.tar 270.0 Kb (http)(custom) TAR (of GPR)
GSE36326_SKBR3-FCF-run1.gpr.gz 109.2 Kb (ftp)(http) GPR
GSE36326_SKBR3-FCF-run2.gpr.gz 112.7 Kb (ftp)(http) GPR
Processed data included within Sample table

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