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Series GSE3621 Query DataSets for GSE3621
Status Public on Jul 31, 2007
Title R6/1 brain hemisphere time series gene expression
Organism Mus musculus
Experiment type Expression profiling by array
Summary HD R6/1 transgenic mouse line brain hemispheres dissected. RNA targets were created for transgenics and wildtypes at time points 18, 22 and 27 weeks. Profiles and data analysis performed using the Bioconductor software and linear model contrasts using LIMMA on RMA probeset summarys.
Keywords: timecourse
Overall design 18 samples extracted, 3 transgenic plus 3 littermate controls analysed at each timepoint.
Contributor(s) Jones L
Citation(s) 17696994
Submission date Nov 16, 2005
Last update date Feb 11, 2019
Contact name Lesley Jones, Angela Hodges
Phone +44 2920 745175
Organization name Cardiff University School of Medicine
Department Psychological Medicine
Street address Heath Park
City Cardiff
ZIP/Postal code CF14 4XN
Country United Kingdom
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (18)
GSM83862 R6/1 27 week wildtype_1338
GSM83863 R6/1 18 week wildtype_15E8
GSM83864 R6/1 27 week transgenic_2C4C
BioProject PRJNA93723

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE3621_RAW.tar 105.9 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file

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