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Series GSE35922 Query DataSets for GSE35922
Status Public on Feb 18, 2012
Title Evaluation of differential expression in the vascular transcriptome among Picea species
Platform organisms Picea glauca; Picea sitchensis
Sample organisms Picea glauca; Picea sitchensis; Picea mariana
Experiment type Expression profiling by array
Summary The goal of this experiment is to assess tissue preferential transcript accumulation and fold difference between two tissues that support secondary vascular growth in three spruces: Picea glauca, Picea sitchensis and Picea mariana. Tissues compared are secondary xylem (wood forming tissue located on the internal side of the cambial meristem) and phelloderm (composite sample of the phloem and phelloderm tissues located on the outer side of the cambial meristem).
 
Overall design One-color comparison of 3 spruce species in 2 tissue types: xylem and phelloderm. 20 biological repetitions per tissue for Picea glauca and 15 for Picea sitchensis and Picea mariana, for a total of 100 slides.
 
Contributor(s) Raherison EM, Caron S, Giguère I, MacKay JJ
Citation(s) 22931377
Submission date Feb 17, 2012
Last update date Jun 18, 2013
Contact name John MacKay
E-mail john.mackay@sbf.ulaval.ca
Organization name Université Laval
Department Centre d'étude de la forêt
Lab Dr. John MacKay
Street address 1030, avenue de la Médecine, Pavillon C.-E. Marchand
City Québec
State/province Québec
ZIP/Postal code G1V 0A6
Country Canada
 
Platforms (1)
GPL15033 Arborea spruce 32K
Samples (100)
GSM876447 Picea sitchensis_phelloderm_rep1
GSM876448 Picea glauca_phelloderm_rep9
GSM876449 Picea sitchensis_xylem_rep1
Relations
BioProject PRJNA152027

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35922_RAW.tar 182.5 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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