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Series GSE35864 Query DataSets for GSE35864
Status Public on Aug 01, 2012
Title The National NeuroAIDS Tissue Consortium Brain Gene Array: Two types of HIV-associated neurocognitive impairment
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Finding the differences in gene expression in three regions of the brain, basal ganglia, white matter, and frontal cortex, in normal, HIV infected, HIV infected with neurocognitive impairment, and HIV infected with both neurocognitive impairment and encephalitis patients.

 
Overall design Twenty-four human subjects in four groups were examined A) Uninfected controls; B) HIV-1 infected subjects with no substantial neurocognitive impairment (NCI); C) Infected with substantial NCI without HIV encephalitis (HIVE); D) Infected with substantial NCI and HIVE. RNA from neocortex, white matter, and neostriatum was processed with the Affymetrix® array platform.
 
Contributor(s) Gelman BB
Citation(s) 23049970
Submission date Feb 16, 2012
Last update date Jan 08, 2019
Contact name Jessica Winkler
E-mail jwinkle@unmc.edu
Organization name University of Nebraska Medical Center
Department Pharmacology and Experimental Neuroscience
Lab Howard Fox
Street address 985800 Nebraska Medical Center- DRC I
City Omaha
ZIP/Postal code 68198
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (72)
GSM876838 A1_white_matter_Control
GSM876839 A2_white_matter_Control
GSM876840 A3_white_matter_Control
Relations
BioProject PRJNA151885

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35864_RAW.tar 390.8 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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