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Series GSE35847 Query DataSets for GSE35847
Status Public on Feb 16, 2012
Title Interspecies Pinaceae comparison experiment
Platform organisms Picea glauca; Picea sitchensis
Sample organisms Larix laricina; Picea abies; Picea glauca; Picea sitchensis; Picea mariana; Pinus strobus; Pinus resinosa
Experiment type Expression profiling by array
Summary The goal of this experiment is to evaluate the potential for utilising this oligonucleotide microarray in other species and genera of the Pinaceae family by using comparative RNA hybridizations in four different spruces (Picea spp), two pines (Pinus spp.) and a larch (Larix laricina), across two tissues, xylem and phelloderm.
 
Overall design One-color comparison of 7 conifer species in 2 tissue types: xylem and phelloderm. Between 4 and 28 biological repetitions per sample type, depending on the species, for a total of 142 slides.
 
Contributor(s) Raherison EM, Caron S, Giguère I, MacKay JJ
Citation(s) 22931377
Submission date Feb 15, 2012
Last update date Jun 18, 2013
Contact name John MacKay
E-mail john.mackay@sbf.ulaval.ca
Organization name Université Laval
Department Centre d'étude de la forêt
Lab Dr. John MacKay
Street address 1030, avenue de la Médecine, Pavillon C.-E. Marchand
City Québec
State/province Québec
ZIP/Postal code G1V 0A6
Country Canada
 
Platforms (1)
GPL15033 Arborea spruce 32K
Samples (142)
GSM876375 Picea mariana_phelloderm_rep1
GSM876376 Larix laricina_phelloderm_rep1
GSM876377 Picea glauca_phelloderm_rep1
Relations
BioProject PRJNA151863

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35847_RAW.tar 195.6 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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