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Series GSE35685 Query DataSets for GSE35685
Status Public on Aug 15, 2012
Title Lymphoid Priming in Human Bone Marrow Begins Prior to CD10 Expression with Up-Regulation of L-selectin
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Studies of adult human hematopoiesis have until now relied on the expression of CD10 to define lymphoid commitment. We report a novel lymphoid-primed population in human bone marrow that is generated from hematopoietic stem cells (HSC) prior to the onset of CD10 expression and B cell commitment, and is identified by high levels of the homing molecule L-selectin (CD62L). CD10-CD62Lhi progenitors have full lymphoid (B/T/NK) potential, and show reduced myeloid and absent erythroid potential. Genome-wide gene expression analysis demonstrates that the CD10-CD62Lhi population represents an intermediate stage of differentiation between CD34+CD38- HSC and CD34+lin-CD10+ progenitors marked by down-regulation of TAL1 and MPL, upregulation of E2A, CD3E and IL2RG expression, and absent B cell commitment or RAG1/2 expression. Immature CD34+CD1a- thymocytes are also CD62Lhi and L-selectin ligands are expressed at the cortico-medullary junction, suggesting a possible role for L-selectin in human thymic homing. These studies identify the earliest stage of lymphoid priming in human bone marrow.
 
Overall design Freshly harvested human bone marrow was ficoll purified, enriched for CD34+, and then FACS sorted. It was then sorted into 3 samples CD34+CD38-, CD34+ CD10- CD62L++, and CD34+ CD10+, with 3 independent biological replicates
 
Contributor(s) Kohn LA, Hao Q, Sasidharan R, Parekh C, Ge S, Zhu J, Mikkola H, Crooks GM
Citation(s) 22941246
Submission date Feb 10, 2012
Last update date Mar 25, 2019
Contact name Lisa Kohn
E-mail(s) Lakohn@ucla.edu
Organization name UCLA
Street address 650 charles e young drive south
City los angeles
State/province ca
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (9)
GSM873478 huBM_CD38_fresh_rep1
GSM873479 huBM_CD38_fresh_rep2
GSM873480 huBM_CD38_fresh_rep3
Relations
BioProject PRJNA152411

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35685_RAW.tar 39.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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