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Series GSE35308 Query DataSets for GSE35308
Status Public on May 01, 2012
Title Transcriptional response of FZF1 alleles from S. cerevisiae and S. paradoxus to the addition of sulfite
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by array
Summary Transcriptional profiling of four different yeast FZF1 alleles: S. cerevisiae, S. paradoxus and two reciprocal chimeras with the coding and 5' noncoding region from opposite species of S. cerevisiae and S. paradoxus, both before and 15 minutes after sulfite addition. FZF1 is a transcription factor that is known to be turned on in response to sulfite. Here we determine whether the FZF1 allele from two species leads to different transcriptional responses and the effect of the individual noncoding and coding regions on the transcriptional response.
 
Overall design Two-color experiment, 4 Strains x 2 Timepoints each compared to a reference pool made up of all samples. 3 Biologic replicates. With dye-swaps
 
Contributor(s) Fay J, Engle E
Citation(s) 22719269
Submission date Jan 24, 2012
Last update date Oct 31, 2019
Contact name Justin Fay
E-mail(s) jfay@genetics.wustl.edu
Organization name Washington University
Street address Center for Genome Sciences Rm 5526, 4444 Forest Park Pkwy
City Saint Louis
State/province Missouri
ZIP/Postal code 63108
Country USA
 
Platforms (1)
GPL9825 Agilent-016322 Yeast (V2) Gene Expression 8x15K Microarray (Feature Number version)
Samples (24)
GSM865637 S.cerevisiae FZF1 allele at t=0min replicate 2
GSM865638 S.cerevisiae FZF1 allele at t=15min replicate 3
GSM865639 5' S.paradoxus-S.cerevisiae FZF1 allele at t=15min replicate 3
Relations
BioProject PRJNA150741

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35308_RAW.tar 39.6 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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