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| Status |
Public on Jan 01, 2013 |
| Title |
Transcriptome of normal, paracancerouse and cancerous bladder tissues based on RNA-Seq method |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
In order to support our research of bladder cancer in human genome, we conducted massively parallel pyrosequencing of mRNAs (RNA-Seq) using normal, paracancerouse and cancerous human bladder tissues. We obtained a total of 30.0 million read pairs from normal, 33.1 million read pairs from paracancerous and 36.5 million read pairs from cancerous. The RNA-Seq data derived from the sample illustrated the differencially expression genes among normal, paracancerous and cancerous bladder tissues of human.
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| Overall design |
3 samples examined: normal tissue, paracancerous tissue, cancerous tissue.
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| Contributor(s) |
ShuFang Z |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Jan 18, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
shufang zhang |
| E-mail(s) |
haikouyiyuan@126.com
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| Organization name |
haikou people hospital
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| Street address |
people avenue NO.43
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| City |
haikou |
| ZIP/Postal code |
570208 |
| Country |
China |
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| Platforms (1) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
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| Samples (3) |
| GSM863055 |
bladder tissue from human s1, normal |
| GSM863056 |
bladder tissue from human s2, paracancerous |
| GSM863057 |
bladder tissue from human s3, cancerous |
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| Relations |
| SRA |
SRP010384 |
| BioProject |
PRJNA150663 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE35178_gene_exp.diff.gz |
5.2 Mb |
(ftp)(http) |
DIFF |
| GSE35178_isoform_exp.diff.gz |
16.0 Mb |
(ftp)(http) |
DIFF |
SRA Run Selector |
| Processed data are available on Series record |
| Raw data are available in SRA |
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