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Series GSE35140 Query DataSets for GSE35140
Status Public on Jun 20, 2013
Title Genome-wide identification of CTCF and Cohesin binding sites in neonatal mouse brain
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq for CTCF and Rad21 in 3 week old mouse brain from reciprocal BxC and CxB crosses. One biological replicate of each.
Overall design Examination of CTCF and Cohesin binding sites in neonetal mouse brain
Contributor(s) Prickett AR, Barkas N, McCole RB, Hughes S, Amante SM, Schulz R, Oakey RJ
Citation(s) 23804403
Submission date Jan 17, 2012
Last update date May 15, 2019
Contact name Rebecca J Oakey
Organization name King's College London
Department Medical and Molecular Genetics
Street address Great Maze Pond
City London
ZIP/Postal code SE1 9RT
Country United Kingdom
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (8)
GSM862556 input CTCF BxC
GSM862557 input CTCF CxB
GSM862558 input Rad21 BxC
SRA SRP010362
BioProject PRJNA150703

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35140_RAW.tar 37.6 Gb (http)(custom) TAR (of BAM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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