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| Status |
Public on Oct 23, 2014 |
| Title |
Ketogulonicigenium vulgare cells: Acid-stressed vs. Control |
| Platform organism |
Ketogulonicigenium vulgare WSH-001 |
| Sample organism |
Ketogulonicigenium vulgare |
| Experiment type |
Expression profiling by array
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| Summary |
Transcriptional profiling of K. vulgare cells, co-cultured with Bacillus megaterium, comparing control untreated cells with cells treated with pH 4.0 for 2 h. Differentially expressed genes in acid-stressed cells were analyzed. The aim was to investigate the mechanisms of K. vulgare in response to acid stress on global gene expression.
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| Overall design |
Two-condition experiment, acid-stressed (pH 4.0) cells vs. control cells. Biological replicates: 3 control replicates, 3 acid-stressed replicates.
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| Contributor(s) |
Yang H, Liu L, Chen J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Oct 20, 2011 |
| Last update date |
Oct 23, 2014 |
| Contact name |
Haoru Yang |
| E-mail(s) |
haoruyang@gmail.com
|
| Organization name |
Jiangnan University
|
| Street address |
1800 Lihu Road
|
| City |
Wuxi |
| ZIP/Postal code |
214122 |
| Country |
China |
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| Platforms (1) |
| GPL14693 |
Agilent_028085 Ketogulonigenium vulgare custom microarray [Probe Name version] |
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| Samples (6)
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| GSM819916 |
Acid-Stressed K.vulgare Cell Replicate 1 |
| GSM819917 |
Acid-Stressed K.vulgare Cell Replicate 2 |
| GSM819918 |
Acid-Stressed K.vulgare Cell Replicate 3 |
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| Relations |
| BioProject |
PRJNA149507 |
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