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Series GSE313869 Query DataSets for GSE313869
Status Public on Dec 15, 2025
Title Impact of Fc engineering on the transcriptional profile of monocytes and interstitial macrophages in the lungs of Hu-FcgR Tg mice after MA30 infection
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary As the SARS-CoV-2 pandemic progressed, many monoclonal antibodies (mAbs) that neutralized infection against initial strains lost potency against later variants due to accumulation of mutations in the spike protein. Nonetheless, some mAbs, including S309, the parent of the therapeutically used sotrovimab, remained protective in animals against Omicron variants despite reduced neutralizing potential, with Fc-mediated effector functions likely sustaining inhibitory activity. Here, we identify Fc variants of S309 that confer enhanced protection against SARS-CoV-2 infection in a humanized Fcg receptor transgenic (Hu-FcgR Tg) mouse model of infection. Versions of S309 that are afucosylated (AFUC) and contain a G236A (GA) mutation in the Fc region showed increased binding to FcgRs IIA, IIIA, and IIIB and enhanced phagocytic activity in cell culture-based assays. Treatment with S309-GA-AFUC resulted in less viral burden, inflammation, and pulmonary ventilatory dysfunction in the lungs of Hu-FcgR Tg mice challenged with SARS-CoV-2 strains compared to the parental S309 mAb or a variant (S309-GRLR) lacking Fc effector functions. The enhanced protection in the lung conferred by S309-GA-AFUC required trafficking of CCR2-expressing monocytes to reduce SARS-CoV-2 viral burden and lung injury. Flow cytometry and RNA sequencing analyses showed that compared to the parental S309 mAb, S309-GA-AFUC treatment reduced the inflammatory state and induced a reparative transcriptional signature in monocytes and interstitial macrophages. Overall, our findings demonstrate that Fc engineering to increase antibody binding to activating FcgRs can strengthen effector functions, shape myeloid transcriptional profiles, and enhance protection against SARS-CoV-2 infection in vivo.
 
Overall design RNA-seq profiling of monocytes and interstitial macrophages in the lungs of Hu-FcgR Tg day 3 following MA30 infection
 
Contributor(s) Mackin SR, Karl CE, Liang C, Kleverov M, Khan MZ, Selvam T, Mack M, Alter G, Guarino B, Corti D, Schmid MA, Diamond MS
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Submission date Dec 15, 2025
Last update date Dec 15, 2025
Contact name Michael S. Diamond
E-mail(s) diamond@wusm.wustl.edu
Organization name Washington University School of Medicine
Department Immunology and Pathology
Lab Michael Diamond Laboratory
Street address 425 S. Euclid Ave
City St.Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL34290 Illumina NovaSeq X Plus (Mus musculus)
Samples (36)
GSM9376898 A1_Naïve monocytes
GSM9376899 A2_Naïve monocytes
GSM9376900 A3_Naïve monocytes
Relations
BioProject PRJNA1381704

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE313869_gene_count.tsv.gz 3.4 Mb (ftp)(http) TSV
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Raw data are available in SRA

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