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Series GSE31386 Query DataSets for GSE31386
Status Public on Apr 03, 2012
Title Microarray expression analysis of Drosophila DrosDel deficiency lines
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary Microarray data of DrosDel deficiency (Df/+) and parental strain diploid flies along with spike-in controls was performed on the Nimblegen 12-plex array platform. Samples are named in this dataset according to the following sample naming scheme: tissue_genotype shorthand_sex_biological replicate #.
Overall design PolyA+ mRNA was isolated in triplicate to quadruplicate from 5 day old adult female or male whole flies. Female and male mRNA were labeled with Cy3 or Cy5 dyes separately and hybridized to Drosophila 12-plex Nimblegen arrays.
Contributor(s) Malone JH, Cho DY, Mattiuzzo NR, Artieri CG, Jiang L, Dale RK, Smith HE, McDaniel J, Munro S, Salit M, Andrews J, Przytycka TM, Oliver B
Citation(s) 22531030
Submission date Aug 15, 2011
Last update date Feb 05, 2015
Contact name Brian Oliver
Phone 301-496-5495
Organization name NIDDK, NIH
Department LCDB
Lab Developmental Genomics
Street address 50 South Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platforms (1)
GPL8593 NimbleGen Drosophila melanogaster 145K 12plex custom expression array (080523_D_melanogaster_5.5_expr)
Samples (134)
GSM778493 Wholeflies_w1118_Female_R1
GSM778494 Wholeflies_w1118_Female_R2
GSM778495 Wholeflies_w1118_Female_R3
This SubSeries is part of SuperSeries:
GSE31407 Drosophila DrosDel deficiency and diploid control flies
BioProject PRJNA154153

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31386_DrosDel_GEO_RAW.txt.gz 47.6 Mb (ftp)(http) TXT
GSE31386_RAW.tar 632.9 Mb (http)(custom) TAR (of PAIR)
Raw data provided as supplementary file
Processed data included within Sample table
Raw data are available on Series record
Processed data provided as supplementary file

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