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Status |
Public on Jul 14, 2011 |
Title |
[E-MTAB-444] Transcription profiling by high throughput sequencing of Cleome gynandra developing and mature leaves |
Organism |
Gynandropsis gynandra |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
Cleome gynandra leaf development RNA-seq RNA-seq have been performed on developing (2mm length) and mature (10mm length) leaves of the C4 photosynthesis plant Cleome gynandra. 6 runs of Illumina 36-42 bp single end have been performed
ArrayExpress Release Date: 2010-12-01 Publication Author List: Sylvain Aubry, Mali Salmon, Kim M Rutherford, Paul Bertone, Andrea Brautigam, Andreas PM Weber, Krystyna A Kelly, Julian M Hibberd
Publication Title: De novo transcriptome assembly enables quantitative expression analysis in non-sequenced model organisms
Person Roles: submitter Person Last Name: Aubry Person First Name: Sylvain Person Mid Initials: Person Email: sa530@cam.ac.uk Person Phone: +441223 330 220 Person Address: Department of Plant Sciences. University of Cambridge. Downing Street. CB2 3EA Cambridge Person Affiliation: University of Cambridge
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Overall design |
Experimental Design: development_or_differentiation_design Experimental Factor Name: DEVELOPMENTALSTAGE Experimental Factor Type: developmental_stage Quality Control Type: biological_replicates
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Citation missing |
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Submission date |
Jul 12, 2011 |
Last update date |
May 15, 2019 |
Organization |
European Bioinformatics Institute |
E-mail(s) |
miamexpress@ebi.ac.uk
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Lab |
ArrayExpress
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Street address |
Wellcome Trust Genome Campus
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City |
Hinxton |
State/province |
Cambridgeshire |
ZIP/Postal code |
CB10 1SD |
Country |
United Kingdom |
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Platforms (1) |
GPL13890 |
Illumina Genome Analyzer II (Cleome gynandra) |
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Samples (6)
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Relations |
SRA |
ERP000399 |
ArrayExpress |
E-MTAB-444 |
BioProject |
PRJNA144505 |