|
| Status |
Public on Jan 31, 2016 |
| Title |
Expression analysis of colorectal carcinoma cells with defunct TP53 using TileShuffle |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by genome tiling array
|
| Summary |
Whole transcriptome expression analysis of colorectal carcinoma cells with defunct TP53 on Affymetrix Human Tiling 1.0 array set. Expression data were processed with our new permutation approach TileShuffle.
|
| |
|
| Overall design |
We analyzed one Affymetrix Human Tiling 1.0R set
|
| |
|
| Contributor(s) |
Reiche K, Kretzschmar A, Horn F, Hackermüller J, Engeland K |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 08, 2011 |
| Last update date |
Jan 31, 2016 |
| Contact name |
Kristin Reiche |
| E-mail(s) |
kristin.reiche@izi.fraunhofer.de
|
| Organization name |
Fraunhofer Institute for Cell Therapy and Immunology
|
| Department |
Diagnostics
|
| Street address |
Perlickstr. 1
|
| City |
Leipzig |
| ZIP/Postal code |
04103 |
| Country |
Germany |
| |
|
| Platforms (14)
|
| GPL6156 |
[Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1 |
| GPL6157 |
[Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2 |
| GPL6158 |
[Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3 |
| GPL6159 |
[Hs35b_M04R] Affymetrix Human Tiling 1.0R Set, Array 4 |
| GPL6160 |
[Hs35b_M05R] Affymetrix Human Tiling 1.0R Set, Array 5 |
| GPL6161 |
[Hs35b_M06R] Affymetrix Human Tiling 1.0R Set, Array 6 |
| GPL6162 |
[Hs35b_M07R] Affymetrix Human Tiling 1.0R Set, Array 7 |
| GPL6163 |
[Hs35b_M08R] Affymetrix Human Tiling 1.0R Set, Array 8 |
| GPL6164 |
[Hs35b_M09R] Affymetrix Human Tiling 1.0R Set, Array 9 |
| GPL6165 |
[Hs35b_M10R] Affymetrix Human Tiling 1.0R Set, Array 10 |
| GPL6166 |
[Hs35b_M11R] Affymetrix Human Tiling 1.0R Set, Array 11 |
| GPL6167 |
[Hs35b_M12R] Affymetrix Human Tiling 1.0R Set, Array 12 |
| GPL6168 |
[Hs35b_M13R] Affymetrix Human Tiling 1.0R Set, Array 13 |
| GPL6169 |
[Hs35b_M14R] Affymetrix Human Tiling 1.0R Set, Array 14 |
|
| Samples (14)
|
| GSM739412 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipA |
| GSM739413 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipB |
| GSM739414 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipC |
| GSM739415 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipD |
| GSM739416 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipE |
| GSM739417 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipF |
| GSM739418 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipG |
| GSM739419 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipH |
| GSM739420 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipI |
| GSM739421 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipJ |
| GSM739422 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipK |
| GSM739423 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipL |
| GSM739424 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipM |
| GSM739425 |
colorectal carcinoma cells with defunct TP53 using TileShuffle ChipN |
|
| This SubSeries is part of SuperSeries: |
| GSE29970 |
Differential expression analysis of colorectal carcinoma cells (defunct TP53 versus active TP53) using TileShuffle |
|
| Relations |
| BioProject |
PRJNA155239 |
Less...
More...