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| Status |
Public on Feb 15, 2025 |
| Title |
Gene expression profile at single cell level of mouse liver in whole and fibrotic niche of the liver [FiNi-seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Age-dependent fibrosis accumulated in the liver includes driver cell types of aging. We used single cell RNA sequencing (scRNA-seq) from specially digested liver to analyze the age-related fibrosis.
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| Overall design |
The liver was digested to enriched the fibrotic niche and was sequenced in parallel with control data. Experiment was done in CCl4-treated mouse to see early fibrosis niche
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| Contributor(s) |
Tak K, Kim J, Park M, Kim C, Park J |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Feb 15, 2025 |
| Last update date |
Feb 17, 2025 |
| Contact name |
Kwon Yong Tak |
| Organization name |
KAIST
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| Street address |
Gu Sung Street
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| City |
Daejeon |
| ZIP/Postal code |
34141 |
| Country |
South Korea |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE276072 |
Gene expression profile at single cell level of mouse liver in whole and fibrotic niche of the liver |
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| Relations |
| BioProject |
PRJNA1224215 |
