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Series GSE28755 Query DataSets for GSE28755
Status Public on May 10, 2011
Title Comparative sequence analysis of plant small RNAs
Organisms Citrus sinensis; Chlamydomonas reinhardtii; Volvox carteri; Ginkgo biloba; Picea abies; Persea americana; Carica papaya; Cucurbita maxima; Populus trichocarpa; Capsicum annuum; Solanum lycopersicum; Nicotiana tabacum; Petunia x hybrida; Solanum tuberosum; Erythranthe guttata; Lactuca sativa; Hordeum vulgare; Setaria italica; Sorghum bicolor; Triticum aestivum; Zea mays; Musa acuminata; Amborella trichopoda; Marsilea quadrifolia; Zostera marina; Gossypium arboreum; Vitis vinifera; Silene latifolia; Panicum virgatum; Chara corallina; Cycas rumphii; Nuphar advena; Aristolochia fimbriata; Miscanthus x giganteus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 26814964, 22156213, 24759728
Submission date Apr 20, 2011
Last update date May 15, 2019
Contact name Emanuele De Paoli
E-mail(s) emanuele.depaoli@gmail.com
Phone 00390432558676
Organization name University of Udine
Department Agricultural, Food, Environmental and Animal Sciences
Lab E. De Paoli
Street address via delle Scienze 206
City Udine
State/province UDINE
ZIP/Postal code 33100
Country Italy
 
Platforms (34)
GPL9100 Illumina Genome Analyzer II (Chlamydomonas reinhardtii)
GPL9328 Illumina Genome Analyzer II (Triticum aestivum)
GPL9361 Illumina Genome Analyzer II (Zea mays)
Samples (99)
GSM346607 Small RNAs from Petunia cosuppressed flower
GSM433598 Small RNAs from petunia WT flower
GSM433620 Small RNAs from maize leaves
This SuperSeries is composed of the following SubSeries:
GSE13764 High-throughput sequencing of small RNAs associated with Chalcone Synthase A (CHS-A) sense cosuppression in petunia
GSE17339 High-throughput sequencing of small RNAs in Zea mays (maize)
GSE20056 High-throughput sequencing of small RNAs in Miscanthus x giganteus
Relations
BioProject PRJNA138711

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE28755_RAW.tar 816.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp

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