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Series GSE275288 Query DataSets for GSE275288
Status Public on Jan 06, 2025
Title LncRNA IRF1-AS1/Gm12216 regulates the interferon response to viral challenge [ChIRP-Seq]
Organism Homo sapiens
Experiment type Other
Summary Long non-coding RNAs (lncRNAs) are important regulators of the immune response. Here we study lincRNA IRF1-AS1 (human) and its mouse ortholog Gm12216. We established that IRF1-AS1/Gm12216 is involved in the antiviral response.
 
Overall design Three replicate samples of THP cells were used to perform ChIRP-Seq and appropriate controls
 
Contributor(s) Cyr Y, Schlamp F, Delbare S, Moore KJ, van Solingen C
Citation(s) 39773901
Submission date Aug 20, 2024
Last update date Jan 09, 2025
Contact name Sofie Delbare
Organization name NYU Langone
Street address 435 East 30th Street
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (12)
GSM8474225 input_rep1
GSM8474226 input_rep2
GSM8474227 input_rep3
Relations
BioProject PRJNA1150190

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Supplementary file Size Download File type/resource
GSE275288_RAW.tar 42.5 Mb (http)(custom) TAR (of NARROWPEAK)
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Raw data are available in SRA

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