|
| Status |
Public on Jan 09, 2025 |
| Title |
Chromatin accessibility analysis of human mesenchymal stem cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We integrated ATAC-seq analyses of human MSC with CRISPRi screening to identify potential regulatory regions controlling UBE2E2 expression and/or UBE2E1 expression.
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| |
|
| Overall design |
Duplicate human MSC cell samples were analyzed. Library quality control and sequencing were performed by Novogene (Novogene, CA, USA) on a NovaSeq 6000 sequencer.
|
| Web link |
https://insight.jci.org/articles/view/184140
|
| |
|
| Contributor(s) |
Zhang Y, Liu S, Steinhauser M |
| Citation(s) |
39656538 |
| |
| Submission date |
Jun 07, 2024 |
| Last update date |
Jan 10, 2025 |
| Contact name |
Yang Zhang |
| E-mail(s) |
zhangy2293@mail.sysu.edu.cn
|
| Organization name |
University of Pittsburgh
|
| Department |
Medicine
|
| Lab |
Steinhauser
|
| Street address |
100 Technology Dr.
|
| City |
Pittsburgh |
| State/province |
PA |
| ZIP/Postal code |
15219 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA1121301 |
