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| Status |
Public on Jan 30, 2012 |
| Title |
Transcriptome of mouse erythroid cells (part1) poly(A)+ |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report genome-wide maps of transcription in mouse erythroid cells. We used an approach to survey poly(A)+ (mRNA) (GSE26877) and non-polyadenylated RNA poly(A)- (GSE27920) separately. This provides an alternative framework for comprehensive transcriptome profiling in mammalian cells.
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| |
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| Overall design |
Two Samples. mRNA-seq from wild type murine Ter119+ cells and mRNA-seq from ΔMCS-P6MCS-R3-/- Ter119+ cells
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| |
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| Contributor(s) |
Kowalczyk MS, Hughes JR, Sloane-Stanley JA, Ponting CP, Wood WG, Higgs DR |
| Citation(s) |
22264824 |
| |
| Submission date |
Jan 26, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Monika S Kowalczyk |
| E-mail(s) |
monika.kowalczyk@imm.ox.ac.uk
|
| URL |
http://www.imm.ox.ac.uk/wimm-research/molhaem/doug-higgs
|
| Organization name |
Weatherall Institute of Molecular Medicine, University of Oxford
|
| Department |
MRC Molecular Haematology Unit
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| Lab |
Higgs Group
|
| Street address |
Headley Way
|
| City |
Oxford |
| State/province |
Oxfordshire |
| ZIP/Postal code |
OX3 9DS |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
|
| Samples (2) |
| GSM661638 |
wild type Murine Ter119+ mRNA-seq |
| GSM661639 |
Mutant ΔMCS-P6MCS-R3-/- Murine erythroid cells mRNA-seq |
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| This SubSeries is part of SuperSeries: |
| GSE27921 |
Intragenic enhancers act as alternative promoters |
|
| Relations |
| SRA |
SRP005610 |
| BioProject |
PRJNA141989 |
