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Series GSE266115 Query DataSets for GSE266115
Status Public on Sep 01, 2024
Title Stimulation of fracture mineralization by salt-inducible kinase inhibitors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Over 6.8 million fractures are reported annually in the US, accounting for 20% of all musculoskeletal injuries. Approximately 10% of fractures will experience delayed- or non-union. Parathyroid hormone (PTH) analogs and anabolic osteoporosis therapeutics can stimulate fracture repair in animal models and patients with chronic nonunion. Previous studies have demonstrated that small molecule salt inducible kinase (SIK) inhibitors mimic PTH action in vitro and in vivo. Therefore, we hypothesize that YKL-05-099, a small molecule SIK inhibitor, will accelerate fracture callus osteogenesis.
 
Overall design 126 nine-week-old female C3H/HeJ slow fracture healing mice underwent unilateral intramedullary femoral shaft pinning and a midshaft fracture. Thereafter, animals received daily subcutaneous injections of vehicle (PBS), YKL-05-099 (15mg/kg), or PTH 1-34 (100μg/kg). Mice were euthanized at 10, 14, and 21 days postoperatively. The callus tissues were assessed by RT-qPCR to detect fracture repair marker genes. Additionally, early time points were evaluated histologically and through single-cell RNA-Seq. μCT images were obtained for image-based callus analysis. Three-point bending testing was conducted on a group of femurs to evaluate tissue biomechanics. A hydrogel-based system for delivering PTH and nanoparticles containing SIK2 and SIK3 siRNAs was developed and tested in vitro and in vivo (N=32).
 
Contributor(s) Wang JS, Momenzadeh K, Wein MN, Nazarian A
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Submission date Apr 29, 2024
Last update date Sep 01, 2024
Contact name Jialiang Wang
E-mail(s) jialiang.wang@utsouthwestern.edu
Organization name University of Texas Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (3)
GSM8240927 D7_Ctrl
GSM8240928 D7_PTH
GSM8240929 D7_YKL
Relations
BioProject PRJNA1105911

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE266115_RAW.tar 70.5 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA

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