|
| Status |
Public on Oct 22, 2024 |
| Title |
Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Other
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
we present a multi-modal spatial technology that allows simultaneous profiling of four different modalities, including multi epigenomic modalities (any combination of two histone modifications and open chromatin at the same time), whole transcriptome, and a panel of proteins at tissue scale and cellular level in a spatially resolved manner.
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| |
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| Overall design |
Spatially resolved multiple modalities sequencing in mouse tissues.
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| |
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| Contributor(s) |
Deng Y, Guo P, Mao L |
| Citation(s) |
39345645 |
| |
| Submission date |
Apr 05, 2024 |
| Last update date |
Jan 29, 2025 |
| Contact name |
Liran Mao |
| Organization name |
University of Pennsylvania
|
| Department |
Perelman School of Medicine
|
| Street address |
422 Curie Boulevard
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (12)
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| Relations |
| BioProject |
PRJNA1096722 |
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