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Series GSE25710 Query DataSets for GSE25710
Status Public on Dec 04, 2010
Title [E-MTAB-223] ChIP-seq for FOXA1, ER and CTCF in breast cancer cell lines
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Growth cells and map of ER, FoxA1 and CTCF binding at whole genome level.

ArrayExpress Release Date: 2010-10-29

Person Roles: submitter
Person Last Name: Hurtado
Person First Name: Antoni
Person Email:
Person Affiliation: Uppsala University

Overall design Experimental Design: high_throughput_sequencing_design
Experimental Design: binding_site_identification_design
Experimental Factor Name: IMMUNOPRECIPITATE
Experimental Factor Name: CELL_LINE
Experimental Factor Type: immunoprecipitate
Experimental Factor Type: cell_line
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Submission date Nov 30, 2010
Last update date May 15, 2019
Organization European Bioinformatics Institute
Lab ArrayExpress
Street address Wellcome Trust Genome Campus
City Hinxton
State/province Cambridgeshire
ZIP/Postal code CB10 1SD
Country United Kingdom
Platforms (2)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (53)
GSM631452 [E-MTAB-223] E2_ER_ChIP_exp1_lane1
GSM631453 [E-MTAB-223] E2_ER_ChIP_exp1_lane2
GSM631454 [E-MTAB-223] E2_ER_ChIP_exp2_lane1
ArrayExpress E-MTAB-223
SRA ERP000380
BioProject PRJNA133829

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25710_RAW.tar 681.0 Mb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data not provided for this record

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