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Series GSE255727 Query DataSets for GSE255727
Status Public on Feb 19, 2024
Title PD-1 restrains thymic IL-2 production and regulatory T cell development
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Inhibitory proteins, such as programmed cell death protein 1 (PD-1), have been extensively studied in peripheral T cell responses to foreign, self, and neoantigens. Notably, these proteins are first expressed during T cell development in the thymus. Reports suggest that PD-1 limits regulatory T cell (Treg) development, but the mechanism by which PD-1 exerts this function remains unknown. The present study expands the evaluation of PD-1 and its ligands in the thymus, demonstrating that some of the highest expressers of PD-1 and PD-L1 are agonist selected cells. Surprisingly, we reveal a selective role for PD-1 in regulating the developmental niche only for Tregs as other agonist selected cell populations, such as natural killer T cells, remain unchanged. We also ruled out PD-1 as a regulator of proliferation or cell death of agonist selected Tregs and further demonstrated that PD-1 deficient Tregs have reduced TCR signaling. Unexpectedly, the data suggests that PD-1 deficient thymocytes produce elevated levels of IL-2, a Treg niche limiting cytokine. Collectively, these data suggest a novel role for PD-1 in regulating IL-2 production and the concurrent agonist selection of thymic Tregs. This observation has implications for the use of checkpoint blockade in the context of cancer and infection.
 
Overall design Thymus from 3-week-old WT or PD-1 knockout animals (C57BL/6J) were processed for flourescence-activated cell sorting (FACS) to sort CD4+ HSA+ CD73- CD25- (CD4 single positive thymocytes) and CD4+ HSA+ CD73- CD25+ (regulatory T cells and CD25+ regulatory T cell progenitors). We sought to examine differences between the WT and PD-1 knockout cells using scRNAseq.
 
Contributor(s) Caruso B, Weeder BR, Thompson RF, Moran AE
Citation(s) 38551395
Submission date Feb 13, 2024
Last update date Apr 17, 2024
Contact name Amy E Moran
Organization name Oregon Health & Science University
Department Department of Cell, Developmental & Cancer Biology
Lab Moran
Street address 3181 SW Sam Jackson Park Rd, Mail code KR-CDCB
City Portland
State/province Oregon
ZIP/Postal code 97239
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM8078620 WT_CD4
GSM8078621 WT_TregP
GSM8078622 KO_CD4
Relations
BioProject PRJNA1076235

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Supplementary file Size Download File type/resource
GSE255727_RAW.tar 222.3 Mb (http)(custom) TAR (of MTX, TSV)
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Raw data are available in SRA

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