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| Status |
Public on Oct 17, 2024 |
| Title |
Transcriptional profiling of Arabidopsis responses to phytosulfokine (PSK) |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Our study reveals that phytosulfokine (PSK) promotes plant growth by suppressing defense mechanisms, highlighting a key link between growth regulation and immune response. By demonstrating how PSK downregulates WRKY TFs and associated kinase activity, this research provides valuable insights into plant biology, offering potential strategies for improving crop yield and pathogen resistance. This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Web link |
https://doi.org/10.1111/tpj.17115
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| Contributor(s) |
Liu D, Greenberg J |
| Citation(s) |
39661720 |
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| Submission date |
Feb 03, 2024 |
| Last update date |
Dec 19, 2024 |
| Contact name |
Dian Liu |
| Organization name |
The University of Chicago
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| Department |
Department of Molecular Genetics and Cell Biology
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| Lab |
Jean Greenberg
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| Street address |
929 East 57th Street GCIS W519P
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| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60637 |
| Country |
USA |
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| Platforms (1) |
| GPL26208 |
Illumina NovaSeq 6000 (Arabidopsis thaliana) |
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| Samples (48)
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| GSM8061750 |
Col-0 shoots, none treatment, day 11, replicate 1 |
| GSM8061751 |
Col-0 shoots, none treatment, day 11, replicate 2 |
| GSM8061752 |
Col-0 shoots, none treatment, day 11, replicate 3 |
| GSM8061753 |
tpst shoots, none treatment, day 11, replicate 1 |
| GSM8061754 |
tpst shoots, none treatment, day 11, replicate 2 |
| GSM8061755 |
tpst shoots, none treatment, day 11, replicate 3 |
| GSM8061756 |
tpst shoots, 10 nM PSK 30 minutes, day 11, replicate 1 |
| GSM8061757 |
tpst shoots, 10 nM PSK 30 minutes, day 11, replicate 2 |
| GSM8061758 |
tpst shoots, 10 nM PSK 30 minutes, day 11, replicate 3 |
| GSM8061759 |
tpst shoots, 10 nM PSK 2 hours, day 11, replicate 1 |
| GSM8061760 |
tpst shoots, 10 nM PSK 2 hours, day 11, replicate 2 |
| GSM8061761 |
tpst shoots, 10 nM PSK 2 hours, day 11, replicate 3 |
| GSM8061762 |
tpst shoots, 10 nM PSK 5 hours, day 11, replicate 1 |
| GSM8061763 |
tpst shoots, 10 nM PSK 5 hours, day 11, replicate 2 |
| GSM8061764 |
tpst shoots, 10 nM PSK 5 hours, day 11, replicate 3 |
| GSM8061765 |
tpst shoots, 10 nM PSK 11 days, day 11, replicate 1 |
| GSM8061766 |
tpst shoots, 10 nM PSK 11 days, day 11, replicate 2 |
| GSM8061767 |
tpst shoots, 10 nM PSK 11 days, day 11, replicate 3 |
| GSM8061768 |
Col-0 roots, none treatment, day 11, replicate 1 |
| GSM8061769 |
Col-0 roots, none treatment, day 11, replicate 2 |
| GSM8061770 |
Col-0 roots, none treatment, day 11, replicate 3 |
| GSM8061771 |
tpst roots, none treatment, day 11, replicate 1 |
| GSM8061772 |
tpst roots, none treatment, day 11, replicate 2 |
| GSM8061773 |
tpst roots, none treatment, day 11, replicate 3 |
| GSM8061774 |
tpst roots, 10 nM PSK 30 minutes, day 11, replicate 1 |
| GSM8061775 |
tpst roots, 10 nM PSK 30 minutes, day 11, replicate 2 |
| GSM8061776 |
tpst roots, 10 nM PSK 30 minutes, day 11, replicate 3 |
| GSM8061777 |
tpst roots, 10 nM PSK 2 hours, day 11, replicate 1 |
| GSM8061778 |
tpst roots, 10 nM PSK 2 hours, day 11, replicate 2 |
| GSM8061779 |
tpst roots, 10 nM PSK 2 hours, day 11, replicate 3 |
| GSM8061780 |
tpst roots, 10 nM PSK 5 hours, day 11, replicate 1 |
| GSM8061781 |
tpst roots, 10 nM PSK 5 hours, day 11, replicate 2 |
| GSM8061782 |
tpst roots, 10 nM PSK 5 hours, day 11, replicate 3 |
| GSM8061783 |
tpst roots, 10 nM PSK 11 days, day 11, replicate 1 |
| GSM8061784 |
tpst roots, 10 nM PSK 11 days, day 11, replicate 2 |
| GSM8061785 |
tpst roots, 10 nM PSK 11 days, day 11, replicate 3 |
| GSM8061786 |
Col-0 seedlings, none treatment, day 7, replicate 1 |
| GSM8061787 |
Col-0 seedlings, none treatment, day 7, replicate 2 |
| GSM8061788 |
Col-0 seedlings, none treatment, day 7, replicate 3 |
| GSM8061789 |
tpst seedlings, none treatment, day 7, replicate 1 |
| GSM8061790 |
tpst seedlings, none treatment, day 7, replicate 2 |
| GSM8061791 |
tpst seedlings, none treatment, day 7, replicate 3 |
| GSM8061792 |
tpst seedlings, 100 nM PSK 5 hours, day 7, replicate 1 |
| GSM8061793 |
tpst seedlings, 100 nM PSK 5 hours, day 7, replicate 2 |
| GSM8061794 |
tpst seedlings, 100 nM PSK 5 hours, day 7, replicate 3 |
| GSM8061795 |
tpst seedlings, 1 uM PSK 5 hours, day 7, replicate 1 |
| GSM8061796 |
tpst seedlings, 1 uM PSK 5 hours, day 7, replicate 2 |
| GSM8061797 |
tpst seedlings, 1 uM PSK 5 hours, day 7, replicate 3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE254986 |
Transcriptional profiling of Arabidopsis shoots and roots responses to phytosulfokine (PSK) |
| GSE254987 |
Transcriptional profiling of Arabidopsis seedlings responses to phytosulfokine (PSK) |
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| Relations |
| BioProject |
PRJNA1072974 |
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