NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE254971 Query DataSets for GSE254971
Status Public on Feb 05, 2024
Title Kupffer cells dictate hepatic responses to the atherogenic dyslipidemic insult (scRNA-Seq)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Apolipoprotein-B (APOB)-containing lipoproteins cause atherosclerosis. Whether the vasculature is initially responding site, or if atherogenic-dyslipidemia affects other organs simultaneously, is unknown. Here we show that the liver responds to a dyslipidemic insult based on inducible models of familial hypercholesterolemia and APOB tracing. An acute transition to atherogenic APOB-lipoprotein levels resulted in uptake by Kupffer cells and rapid accumulation of triglycerides and cholesterol in the liver. Bulk and single-cell RNA-seq revealed an Kupffer cell-specific transcriptional program that was not activated by a high-fat diet alone, or detected in standard liver function or pathological assays, even in the presence of fulminant atherosclerosis. Depletion of Kupffer cells altered the dynamic of plasma and liver lipid concentrations, indicating that these liver macrophages help restrain and buffer atherogenic lipoproteins, whilst simultaneously secreting atherosclerosis-modulating factors into plasma. Our results place Kupffer cells as key sentinels in organizing systemic responses to lipoproteins at the initiation of atherosclerosis.
 
Overall design Liver sample from D374YmCherry-APOB mice. Mice were maintained on a chow diet for 10 days after tamoxifen.
 
Contributor(s) Malin S
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 02, 2024
Last update date Feb 06, 2024
Contact name Stephen Malin
E-mail(s) stephen.malin@ki.se
Organization name Karolinska Institutet
Street address Bioclinicum J8:20, Visionsgatan 4
City Stockholm
ZIP/Postal code 17164
Country Sweden
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (1)
GSM8061586 D374Y mCherry-APOB
Relations
BioProject PRJNA1072727

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE254971_RAW.tar 50.8 Mb (http)(custom) TAR (of H5AD)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap