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Series GSE25259 Query DataSets for GSE25259
Status Public on Nov 11, 2010
Title modENCODE_White Lab: genome-wide ChIP-chip data
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains ChIP-chip data on Affymetrix Drosophila Tiling 2.0R arrays for multiple transcription factor antibodies at various time-points of Drosophila development.

For data usage terms and conditions, please refer to and
Overall design For each combination of time-point and antibody, ChIP experiments have been performed and hybridized on Affymetrix Drosophila Tiling 2.0R arrays. At least 3 biological replicates for the ChIP sample have been hybridized.
Web link
Contributor(s) Negre N, Bild NA, White KP
Citation(s) 21430782
BioProject PRJNA63463
Submission date Nov 10, 2010
Last update date Jul 08, 2015
Contact name Kevin P. White
Organization name University of Chicago
Department Institute for Genomics and Systems Biology
Street address 900 E. 57th STR. 10th FL.
City Chicago
State/province IL
ZIP/Postal code 60615
Country USA
Platforms (1)
GPL6629 [DM_tiling2_MR] Affymetrix Drosophila Tiling 2.0R Array
Samples (18)
GSM621326 E0-8_Kr-D2
GSM621327 Kc167_Trl
GSM621328 E-0-4h_bks
This SubSeries is part of SuperSeries:
GSE23537 modENCODE_White Lab: genome-wide ChIP-chip and ChIP-Seq data

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25259_RAW.tar 2.1 Gb (http)(custom) TAR (of CEL, GFF, WIG)
GSE25259_extracted_0-4h_Input.CEL.gz 34.7 Mb (ftp)(http) CEL
GSE25259_extracted_7T-E-0-4h_Input-7T_Ctl1.CEL.gz 34.7 Mb (ftp)(http) CEL
GSE25259_extracted_7T-E-0-4h_input-0-4h-7T_Ctl2.CEL.gz 34.9 Mb (ftp)(http) CEL
GSE25259_extracted_E-0-4h_Input-0-4h_Ctl1.CEL.gz 34.2 Mb (ftp)(http) CEL
GSE25259_extracted_E-0-8h_Input-0-8h-D_Ctl2.CEL.gz 34.6 Mb (ftp)(http) CEL
GSE25259_extracted_E-0-8h_input_0-8h_Ctl1.CEL.gz 33.7 Mb (ftp)(http) CEL
GSE25259_extracted_ISO1_0-4_Input.CEL.gz 33.4 Mb (ftp)(http) CEL
GSE25259_extracted_ISO1_0-8_Input_A.CEL.gz 34.5 Mb (ftp)(http) CEL
GSE25259_extracted_ISO1_0-8_Input_B.CEL.gz 34.0 Mb (ftp)(http) CEL
GSE25259_extracted_ISO1_4-8_Input.CEL.gz 32.7 Mb (ftp)(http) CEL
GSE25259_extracted_Input_0-8h_B.CEL.gz 34.8 Mb (ftp)(http) CEL
GSE25259_extracted_Input_0-8h_C.CEL.gz 34.5 Mb (ftp)(http) CEL
GSE25259_extracted_KC167_Input_A.CEL.gz 32.1 Mb (ftp)(http) CEL
GSE25259_extracted_KC167_Input_B.CEL.gz 33.2 Mb (ftp)(http) CEL
GSE25259_extracted_S2-Cells_Input-S2_Ctl2.CEL.gz 34.0 Mb (ftp)(http) CEL
GSE25259_extracted_S2-Cells_S2-Mock_Ctl1.CEL.gz 33.6 Mb (ftp)(http) CEL
GSE25259_extracted_Su(Hw)PG_E-0-12h_E-0-12h_Input-A-su(hw)_Ctl1.CEL.gz 35.4 Mb (ftp)(http) CEL
GSE25259_extracted_sens-E-4-8h_Input-sens-A-GFP_Ctl1.CEL.gz 31.3 Mb (ftp)(http) CEL
GSE25259_extracted_sens-E-4-8h_Input-sens-A_Ctl1.CEL.gz 32.2 Mb (ftp)(http) CEL
GSE25259_extracted_sens-E-4-8h_Input-sens-B-GFP_Ctl2.CEL.gz 32.9 Mb (ftp)(http) CEL
GSE25259_extracted_sens-E-4-8h_Input-sens-B_Ctl2.CEL.gz 32.6 Mb (ftp)(http) CEL
GSE25259_extracted_sens-E-4-8h_Input-sens-C-GFP_Ctl3.CEL.gz 33.8 Mb (ftp)(http) CEL
GSE25259_extracted_sens-E-4-8h_Input-sens-C_Ctl3.CEL.gz 33.8 Mb (ftp)(http) CEL
Processed data provided as supplementary file
Raw data provided as supplementary file
Raw data is available on Series record

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