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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 20, 2023 |
| Title |
Aberrant upregulation of RUNX3 activates developmental genes to drive metastasis in gastric cancer. |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
38240752 |
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| Submission date |
Dec 18, 2023 |
| Last update date |
Feb 14, 2024 |
| Contact name |
Masaki Fukuyo |
| E-mail(s) |
fukuyo@chiba-u.jp
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| Organization name |
Chiba University
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| Department |
Department of Molecular Oncology
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| Street address |
1-8-1 Inohana, Chuo-ku
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| City |
Chiba |
| ZIP/Postal code |
260-8670 |
| Country |
Japan |
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| Platforms (3) |
| GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (20)
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| GSM7979651 |
HGC27, wt, H3K27ac, ChIP, rep1 |
| GSM7979652 |
HGC27, wt, H3K27ac, ChIP, rep2 |
| GSM7979653 |
HGC27, RUNX3KO, H3K27ac, ChIP, rep1 |
| GSM7979654 |
HGC27, RUNX3KO, H3K27ac, ChIP, rep2 |
| GSM7979655 |
HGC27, wt, H3K4me3, ChIP, rep1 |
| GSM7979656 |
HGC27, wt, H3K4me3, ChIP, rep2 |
| GSM7979657 |
HGC27, RUNX3KO, H3K4me3, ChIP, rep1 |
| GSM7979658 |
HGC27, RUNX3KO, H3K4me3, ChIP, rep2 |
| GSM7979659 |
HGC27, wt, H3K4me1, ChIP, rep1 |
| GSM7979660 |
HGC27, wt, H3K4me1, ChIP, rep2 |
| GSM7979661 |
HGC27, RUNX3KO, H3K4me1, ChIP, rep1 |
| GSM7979662 |
HGC27, RUNX3KO, H3K4me1, ChIP, rep2 |
| GSM7979663 |
HGC27, wt, RUNX3, ChIP, rep1 |
| GSM7979664 |
HGC27, wt, RUNX3, ChIP, rep2 |
| GSM7979665 |
HGC27, RUNX3KO, RUNX3, ChIP, rep1 |
| GSM7979666 |
HGC27, wt, Input, ChIP, rep1 |
| GSM7979667 |
HGC27, wt, Input, ChIP, rep2 |
| GSM7979668 |
HGC27, RUNX3KO, Input, ChIP, rep1 |
| GSM7979669 |
HGC27, RUNX3KO, Input, ChIP, rep2 |
| GSM7979670 |
HGC27, wt, H3K27ac HiChIP, rep1 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE250479 |
Aberrant upregulation of RUNX3 activates developmental genes to drive metastasis in gastric cancer (ChIP-seq) |
| GSE250480 |
Aberrant upregulation of RUNX3 activates developmental genes to drive metastasis in gastric cancer (HiChIP) |
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| Relations |
| BioProject |
PRJNA1054135 |
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