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Series GSE25029 Query DataSets for GSE25029
Status Public on Jul 01, 2011
Title Ionizing radiation in GI tract of Tweak KO mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary TWEAK/Fn14 signaling may regulate the expression of genes involved in epithelial repair and mucosal inflammation. Comparing the gene signatures in WT and TWEAK KO mice will inform the biology of TWEAK/Fn14 pathway in the GI tract.
 
Overall design Mice were treated with 3 Gy of ionizing radiation. After 6h and 24h mice were sacrificed, and whole colon and jejunum were harvested, and RNA was isolated from these tissues. Each CEL file represents a different mouse.
 
Contributor(s) Kawashima R, Kawamura YI, Oshio T, Son A, Yamazaki M, Hagiwara T, Okada T, Wu P, Szak S, Kawamura YJ, Konishi F, Miyake O, Takeshita E, Saito Y, Burkly LC, Dohi T
Citation(s) 21893119
Submission date Oct 29, 2010
Last update date Feb 11, 2019
Contact name Suzanne Szak
Organization name BiogenIdec, Inc.
Department Drug Discovery
Street address 14 Cambridge Ctr
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (56)
GSM614669 WT_Col_0h_1
GSM614670 WT_Col_6h_1
GSM614671 WT_Col_24h_1
Relations
BioProject PRJNA134407

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE25029_Colon_NormalizedIntensity.txt.gz 4.5 Mb (ftp)(http) TXT
GSE25029_Jejunum_NormalizedIntensity.txt.gz 5.4 Mb (ftp)(http) TXT
GSE25029_RAW.tar 176.3 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data is available on Series record

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