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Series GSE249618 Query DataSets for GSE249618
Status Public on Jan 01, 2024
Title A biphenotypic lymphocyte subset displays both T- and B-cell functionalities
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary T cell/B cell mixed phenotypic lymphocytes have been observed in different disease contexts, yet their presence and function in physiological conditions remain elusive. Here, we provide evidence for the existence of a lymphocyte subset endogenously expressing both T- and B-cell lineage markers in mice by single cell RNA sequencing.
 
Overall design Bone marrow, lymph node and peripheral blood cells isolated from C57BL/6J female mice were stained with Live/Dead dye and lymphocytes were isolated using a BDFACSAria™ IIISorter. Cells were manually counted by Trypan blue and AO-PI after each centrifugation and resuspension. Single cells were processed using Chromium Controller (10x Genomics) according to the manufacturer's protocol. By using Chromium Next GEM Single Cell 5' Kit v2 and Chromium Next GEM Chip K Single Cell Kit , we performed single cell TCR/BCR-seq and 5’ gene expression profiling.
 
Contributor(s) Zhang Y, Guo C
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Submission date Dec 07, 2023
Last update date Jan 01, 2024
Contact name yifan zhang
E-mail(s) 23110700099@m.fudan.edu.cn
Organization name fudan university
Street address no
City shanghai
ZIP/Postal code 201508
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (15)
GSM7951838 BM-1-BCR
GSM7951839 BM_1_ScRNAseq
GSM7951840 BM_1_TCR
Relations
BioProject PRJNA1049826

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Supplementary file Size Download File type/resource
GSE249618_RAW.tar 246.2 Mb (http)(custom) TAR (of CSV, MTX, TSV)
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Raw data are available in SRA

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