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GEO accession:
Series GSE247272
Query DataSets for GSE247272
Status
Public on Apr 17, 2024
Title
CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
38755149
Submission date
Nov 08, 2023
Last update date
May 29, 2024
Contact name
Dalia Hassan
E-mail(s)
dhassan@mdanderson.org
Phone
3467146254
Organization name
MD Anderson Cancer Center
Department
Pulmonary Medicine
Lab
Jichao Chen
Street address
6565 MD Anderson Blvd, Z9.4040, Z9.4040
City
Houston
State/province
TX
ZIP/Postal code
77030
Country
USA
Platforms (2)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
Samples (42)
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GSM7883976
mutant P9 scmultiome GE
GSM7883977
mutant P9 scmultiome ATAC
GSM7883978
control P9 scmultiome GE
GSM7883979
control P9 scmultiome ATAC
GSM7883980
7 wk mutant scmultiome GE
GSM7883981
7-wk mutant scmultiome ATAC
GSM7883982
7-wk control scmultiome GE
GSM7883983
7-wk control scmultiome ATAC
GSM7883984
SeV mutant scmultiome GE
GSM7883985
SeV mutant scmultiome ATAC
GSM7883986
SeV control scmultiome GE
GSM7883987
SeV control scmultiome ATAC
GSM7886399
P2 AT2 cell CEBPA ChIP-seq rep1
GSM7886400
P2 AT2 cell CEBPA ChIP-seq rep2
GSM7886401
P2 AT2 cell CEBPA ChIP-seq rep3
GSM7886402
6-wk AT2 cell CEBPA ChIP-seq rep1
GSM7886403
6-wk AT2 cell CEBPA ChIP-seq rep2
GSM7886404
6-wk AT2 cell CEBPA ChIP-seq rep3
GSM7886405
P2 AT2 cell NKX2-1 ChIP-seq rep1
GSM7886406
P2 AT2 cell NKX2-1 ChIP-seq rep2
GSM7886407
7-wk control AT2 cell NKX2-1 ChIP-seq rep1
GSM7886408
7-wk control AT2 cell NKX2-1 ChIP-seq rep2
GSM7886409
7-wk mutant AT2 cell NKX2-1 ChIP-seq rep1
GSM7886410
7-wk mutant AT2 cell NKX2-1 ChIP-seq rep2
GSM7886411
P8 control AT2 cell NKX2-1 ChIP-seq rep1
GSM7886412
P8 control AT2 cell NKX2-1 ChIP-seq rep2
GSM7886413
P8 mutant AT2 cell NKX2-1 ChIP-seq rep1
GSM7886414
P8 mutant AT2 cell NKX2-1 ChIP-seq rep2
GSM7886417
E14.5 whole lung NKX2-1 ChIP-seq rep1
GSM7886418
E14.5 whole lung NKX2-1 ChIP-seq rep2
GSM7886421
7-wk ctrl AT2 input rep1
GSM7886422
7-wk mutAT2 input rep2
GSM7886423
P8 ctrl AT2 input rep1
GSM7886424
P8 ctrl AT2 input rep2
GSM7886425
P8 mutant AT2 input rep1
GSM7886426
P8 mutant AT2 input rep2
GSM7886427
P2 ctrl AT2 input rep1
GSM7886428
P2 ctrl AT2 input rep2
GSM7886433
6-wk AT2 Input rep1
GSM7886434
6-wk AT2 Input rep2
GSM7886435
E14.5 whole lung Input ChIP-seq rep1
GSM7886436
E14.5 whole lung Input ChIP-seq rep2
This SuperSeries is composed of the following SubSeries:
GSE247130
CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [1]
GSE247271
CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [ChIP-seq]
Relations
BioProject
PRJNA1037034
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE247272_RAW.tar
7.2 Gb
(http)
(custom)
TAR (of BROADPEAK, BW, NARROWPEAK)
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