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Series GSE246688 Query DataSets for GSE246688
Status Public on Jul 17, 2024
Title CUT&Tag, ATAC-seq, bulk RNA-seq and single-nucleus RNA-seq analysis of histone variant H2BE in cortical neurons
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 39025074
Submission date Oct 31, 2023
Last update date Aug 29, 2024
Contact name Emily Feierman
E-mail(s) emily.feierman@gmail.com
Organization name University of Pennsylvania
Street address 3400 Civic Center Blvd
City Philadelphia
ZIP/Postal code 19104
Country USA
 
Platforms (3)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21626 NextSeq 550 (Mus musculus)
GPL32159 NextSeq 1000 (Mus musculus)
Samples (67)
GSM7873058 WT biol rep 1
GSM7873059 WT biol rep 2
GSM7873060 WT biol rep 3
This SuperSeries is composed of the following SubSeries:
GSE246618 CUT&Tag seq analysis of histone variant H2BE in neurons
GSE246686 RNA-seq analysis of WT and H2BE-KO primary cortical neurons
GSE246687 Analysis of histone variant H2BE in neuronal chromatin
Relations
BioProject PRJNA1034122

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE246688_RAW.tar 2.6 Gb (http)(custom) TAR (of BW, TDF, TXT)
SRA Run SelectorHelp

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